Welcome to EPIc SUITE documentation!

The EPIc Suite is a web-based platform designed as an enabling tool for epidemiological modeling and simulation. The suite allows the creation of pipelines for scientific research on epidemics, offering capabilities for working with data, embedding it in models, running simulations and performing analysis and projections. It is designed with a mix of simplicity of use, offering a variety of tools, such as data extraction, data fitting heuristics, dynamic parameters for modeling tendency changes like non-pharmaceutical interventions or new variant appearance, integrated function builder, integrated parameter sensitivity analysis, among others.

Contents

Usage

Installation

To use Lumache, first install it using pip:

(.venv) $ pip install lumache

Creating recipes

To retrieve a list of random ingredients, you can use the lumache.get_random_ingredients() function:

The kind parameter should be either "meat", "fish", or "veggies". Otherwise, lumache.get_random_ingredients() will raise an exception.

For example:

>>> import lumache
>>> lumache.get_random_ingredients()
['shells', 'gorgonzola', 'parsley']

API

Crear Modelos

Modelo SIR

Modelo SEIR

Modelo SEIRHVD

Modelo monopoblacional

Modelo metapoblacional

Funciones

Importar/ exportar

Crear áreas geográficas

Crear matrices de movilidad

Configuración de la matriz

Visualización de la matriz

Ajustar Modelos

Selección de parámetros

Visualización del ajuste

Resumen de selecciones

Despliegue de resultados

Gráficos monopoblacionales

Gráficos metapoblacionales

Configuración de ejes

Mostrar mapas

Visualización simultánea de gráfico y mapa

Exportar resultados